Table 2.
Site no. | 2013 |
2014 |
2015 |
||||||
---|---|---|---|---|---|---|---|---|---|
R. parkeri | “Ca. R. andeanae” | Coinfected | R. parkeri | “Ca. R. andeanae” | Coinfected | R. parkeri | “Ca. R. andeanae” | Coinfected | |
1 | 16 [6:10]/45 [18:27] | 0 [0:0]/45 [18:27] | 0 [0:0]/45 [18:27] | 15 [9:6]/66 [35:31] | 12 [4:8]/66 [35:31] | 2 [1:1]/66 [35:31] | 13 [7:6]/42[22:20] | 5 [4:1]/42[22:20] | 0 [0:0]/42[22:20] |
2 | 17 [8:9]/50 [23:27] | 0 [0:0]/50 [23:27] | 0 [0:0]/50 [23:27] | 2 [0:2]/10 [1:9] | 0 [0:0]/10 [1:9] | 0 [0:0]/10 [1:9] | 0 [0:0]/1[0:1] | 0 [0:0]/1[0:1] | 0 [0:0]/1[0:1] |
3 | NSa | NS | NS | NS | NS | NS | 31[13:18]/58[24:34] | 11[4:7]/58[24:34] | 1[0:1]/58[24:34] |
4 | NS | NS | NS | 2 [1:1]/63 [37:26] | 3 [2:1]/63 [37:26] | 0 [0:0]/63 [37:26] | NS | NS | NS |
Total | 33 [14:19]/95 [41:54] | 0 [0:0]/95 [41:54] | 0 [0:0]/95 [41:54] | 19 [10:9]/139 [73:66] | 15 [6:9]/139 [73:66] | 2 [1:1]/139 [73:66] | 44 [20:24]/101[46:55] | 16 [8:8]/101[46:55] | 1 [0:1]/101[46:55] |
Tick extracts initially positive by rompB QPCR were confirmed by rompA amplicon sequencing (2015 samples) and final QPCR analysis for rickettsial levels (2013–2015).
Not sampled.