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. Author manuscript; available in PMC: 2018 Mar 15.
Published in final edited form as: Mol Ecol. 2017 Jan 17;26(7):2019–2026. doi: 10.1111/mec.13961

Table 2.

Hits of CRISPR spacer clusters originated from the mammoth sample

Cluster consensus sequence Hit Hit
GCATCTCTTCCACTTAAATCTCCTTGTTACGA Enterobacteria phage NJ0
CGGGATAATTCAGCTTTCACATCACGGCAAGA Enterobacteria phage phiEco32
TGCCGGGTTCGACTGGACGCCATTTGCCATCT Enterobacteria phage epsilon15
GGTAAAAACACGGTCTGAACCGACATTCATGT* Enterobacteria phage P7
CATTTTTGCGTGGCGAGCTGCGCCGCGTTCTG* Escherichia phage JLK-2012
ACGATTGGGCAGCCAGAGTTGCCGCCGGGAAA Escherichia coli strain T23 plasmid pEQ1
CGGCCAGGCTGGATTTAAGCGGCACGGCCGCA Uncultured bacterium plasmid pMBUI4
GTCGCCTCAATAGCGCGTTTACCTTTGCTGTT Uncultured bacterium plasmid pMBUI4
GCCAGGGCAAGCGGCCCAAGGGCAAGGTCATA Plasmid pMCBF1
GGGATCTCATCGTCAAAATCGTGAGCCGGATC Escherichia coli strain BK28960 plasmid
CCAGCCGTTCAGTATTGCCGGTGTCAGCAAAA* Enterobacter cloacae strain 34983 plasmid p34983-328.905 kb
GCCGTCGTGCCGTGTTCACCTTTACGAACCTG* Klebsiella pneumoniae ATCC BAA-2146 plasmid pHg
TAAAATGAGAGCTTTTGTTCGCTTGAGCAATA Escherichia coli genome, fimbrial protein
CAAGAAGTACTGAACCGATATACTCGCCAACC Escherichia coli genome, intergenic between two hypothetical proteins
AGGACAGTAAAAATGACGGAATTGTTTATCAG Escherichia coli genome assembly FHI92, tail sheath protein
*

Asterisk mark clusters found in both the mammoth and contemporary data sets.