Table 4.
Protein & | Template | Reference Art | Pentapeptide | Lid Domain | Catalytic Triad | Oxyanion |
---|---|---|---|---|---|---|
551811 | 3GUU | Ericsson et al. [78] | GYSGG Gly160-Gly164 | Asn195-Ser287 | Ser162, Asp309, His341 | Asp92 Gly163 |
87496 | GYSGG Gly188-Gly192 | Leu223-Glu313 | Ser190, Asp334, His368 | Asp96 Gly191 | ||
526309 | GYSGG Gy208-Gly212 | Asn243-Asp332 | Ser210, Asp352, His384 | Asp116 Gly211 | ||
514427 | GHSQG Gly226-Gly230 | Ala258-Phe349 | Ser228, Asp373, His405 | Ile146 Gln229 | ||
510832 | 1K8Q | Roussel et al. [79] and Selvan et al. [80] | CHSQG Cys431-Gly435 | Phe496-Glu550 | Ser433, Asp634, His667 | Leu349 Gln434 |
92423 | GFSQG Gly224-Gly228 | Ile286-Ile321 | Ser226, Asp396, His422 | Leu139 Gln227 | ||
79895 # | No structural homologue of lipase was identified | |||||
135964 | 4 X6U | Dror et al. [81] | AHSMG Ala-152-Gly156 | Phe189-Pro200 | Ser154, Asp275, His297 | Leu70 Met155 |
492160 # | No structural homologue of lipase was identified | |||||
77338 | 3O0D | Bordes et al. [82] | GHSLG Gly214-Gly218 | Thr137-Tyr154 | Ser216, Asp282, His343 | Thr137 Leu217 |
514252 | GHSLG Gly316-Gly320 | Thr230-Trp262 | Ser318, Asp379, His457 | Thr230 Leu319 | ||
502433 * | Complete protein sequence does not model with lipase | |||||
78181 | 3NGM | Lou et al. [83] | GHSLG Gly174-Gly178 | Asn115-Phe126 | Ser176, Asp230, His289 | Ser114 Leu177 |
* Lipase domains restricted to a short fragment of the protein. # No modeling with lipases. & Three-dimensional models are available as Figure S2.