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. 2018 Jan 25;9(2):62. doi: 10.3390/genes9020062

Table 4.

In silico localization of characteristic lipase domains in the candidate lipase proteins from Trichoderma harzianum.

Protein & Template Reference Art Pentapeptide Lid Domain Catalytic Triad Oxyanion
551811 3GUU Ericsson et al. [78] GYSGG Gly160-Gly164 Asn195-Ser287 Ser162, Asp309, His341 Asp92 Gly163
87496 GYSGG Gly188-Gly192 Leu223-Glu313 Ser190, Asp334, His368 Asp96 Gly191
526309 GYSGG Gy208-Gly212 Asn243-Asp332 Ser210, Asp352, His384 Asp116 Gly211
514427 GHSQG Gly226-Gly230 Ala258-Phe349 Ser228, Asp373, His405 Ile146 Gln229
510832 1K8Q Roussel et al. [79] and Selvan et al. [80] CHSQG Cys431-Gly435 Phe496-Glu550 Ser433, Asp634, His667 Leu349 Gln434
92423 GFSQG Gly224-Gly228 Ile286-Ile321 Ser226, Asp396, His422 Leu139 Gln227
79895 # No structural homologue of lipase was identified
135964 4 X6U Dror et al. [81] AHSMG Ala-152-Gly156 Phe189-Pro200 Ser154, Asp275, His297 Leu70 Met155
492160 # No structural homologue of lipase was identified
77338 3O0D Bordes et al. [82] GHSLG Gly214-Gly218 Thr137-Tyr154 Ser216, Asp282, His343 Thr137 Leu217
514252 GHSLG Gly316-Gly320 Thr230-Trp262 Ser318, Asp379, His457 Thr230 Leu319
502433 * Complete protein sequence does not model with lipase
78181 3NGM Lou et al. [83] GHSLG Gly174-Gly178 Asn115-Phe126 Ser176, Asp230, His289 Ser114 Leu177

* Lipase domains restricted to a short fragment of the protein. # No modeling with lipases. & Three-dimensional models are available as Figure S2.