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. 2017 Mar 3;216(10):1254–1263. doi: 10.1093/infdis/jix106

Table 1.

Comparison of Plasmodium Vivax Genetic Diversity Measures Based on 14 Microsatellite Loci

Locality, Year Sample Size Genotypic Diversitya Gene Diversity, Mean ± SDb
G D E Ne He
Regional hospital
 2011 140 79.03 0.99 0.73 7.23 ± 1.34 0.82 ± 0.03
 2012 57 43.32 0.98 0.85 5.77 ± 0.72 0.81 ± 0.03
 2013 37 33.39 0.98 0.95 5.01 ± 0.78 0.74 ± 0.06
Village
 2011 67 53.22 0.99 0.98 3.16 ± 0.25 0.80 ± 0.03
 2012 58 44.55 0.99 0.98 2.51 ± 0.17 0.79 ± 0.03
 2013 37 35.18 0.98 0.97 2.17 ± 0.17 0.81 ± 0.06
IDP settlement
 2011 30 29 0.99 0.98 2.59 ± 0.34 0.75 ± 0.09
 2012 132 44.59 0.95 0.47 4.18 ± 0.37 0.85 ± 0.03
 2013 133 57.84 0.97 0.49 3.94 ± 0.36 0.78 ± 0.04

a“G” denotes the number of multilocus genotypes corrected for sample size. “D” denotes the Simpson diversity index, also known as the Nei genetic diversity, corrected for sample size and ranging from 0 (where 2 randomly chosen individuals in a population share a single genotype) to 1 (where individuals have different genotypes). “E” denotes the genotypic evenness, which ranges from 0 (where one or a few genotypes dominate in a population) to 1 (where all genotypes are of equal frequency in a population).

b“Ne” denotes the number of effective alleles [31]. “He” denotes the expected heterozygosity corrected for sample size [32].