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. 2017 Oct 13;68(18):5207–5220. doi: 10.1093/jxb/erx335

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© Society for Experimental Biology 2017.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

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Fig. 4. — PAMP-responsive genes can be clustered based on temporal expression patterns. PAMP-responsive genes were clustered by STEM (Short Time-series Expression Miner) according to their expression kinetics in wild type plants. Eight major clusters were obtained. The temporal expression profiles of genes in each cluster are represented by line graphs (the top, middle, and bottom graphs of each cluster represent transcripts separated by high, medium, and low expression levels, respectively). The y-axis of each graph is the normalized expression value of each gene in artificial units, and the x-axis is the corresponding time points after elf26 treatment. The numbers in parentheses are the number of genes within each cluster. (This figure is available in color at JXB online.)