Table 1.
SNP | Chromosome | Gene | Reference Base | Substituted Base | Typea | P Value |
---|---|---|---|---|---|---|
rs4986811 b | 11 | WT1 | T | G | Intron | 1.22 × 10–8 |
rs5030172 b | 11 | WT1 | G | C | Intron | 2.07 × 10–8 |
rs5030157 b | 11 | WT1 | C | T | Intron | 2.18 × 10–8 |
rs5030166 b | 11 | WT1 | G | T | Intron | 3.69 × 10–8 |
rs11031780b,c | 11 | WT1 | C | G | Intron | 7.00 × 10–8 |
rs7936152b | 11 | WT1 | G | A | Intron | 7.17 × 10–8 |
rs11031781b | 11 | WT1 | G | A | Intron | 7.18 × 10–8 |
rs11031779b,c | 11 | WT1 | C | T | Intron | 7.68 × 10–8 |
rs2234582b | 11 | WT1 | C | A | Synonymous | 1.49 × 10–7 |
rs72893517b | 11 | WT1 | G | C | Intron | 2.08 × 10–7 |
rs12293603b | 11 | WT1 | C | A | Intron | 5.13 × 10–7 |
rs5030180b | 11 | WT1 | G | A | Intron | 7.06 × 10–7 |
Abbreviations: SNP, single-nucleotide polymorphism.
Bold indicates P ≤ 5 × 10−8.
aPredicted function.
bIndicates an SNP identified in a WT1 transcript variant known to be a target of nonsense mediated decay (NMD).
cIndicates a predicted transcription factor binding site (Ensembl).