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. 2017 Nov 25;68(21-22):5813–5828. doi: 10.1093/jxb/erx391

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© The Author 2017. Published by Oxford University Press on behalf of the Society for Experimental Biology.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

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Fig. 2. — Venn diagram and heatmap analyses of RNASeq data obtained from Santa Rosa (SR) and Sweet Miriam (SM) cultivars at two developmental stages (S2, S4-II). (A) Venn diagram analyses of the 5,727 differentially expressed genes (DEGs), comparing the number of upregulated and downregulated genes within the same stage in different cultivars (SMS2/SRS2 and SMS4-II/SRS4-II) and within the same cultivar in different stages (SRS4-II/SRS2 and SMS4-II/SMS2). (B) Heatmap generated from the 5,727 DEGs from RNA-Seq analysis comparing fold changes in levels of gene expression within the same stage in different cultivars (SMS2/SRS2 and SMS4-II/SRS4-II) and within the same cultivar in different stages (SRS4-II/SRS2 and SMS4-II/SMS2). Heatmap colors represent gene expression fold change levels based on the provided color key scale; red for upregulated genes expression levels, blue for downregulated gene expression levels and white for no changes in gene expression levels.