Table 3.
Enriched pathways involved in secondary metabolism.
| Metabolites | Pathway ID | Pathway | DEGs Genes with Pathway Annotation (925) | All Genes with Pathway Annotation (11,433) |
|---|---|---|---|---|
| Terpenes | ko00902 | Monoterpenoid biosynthesis | 8 (0.86%) | 17 (0.15%) |
| ko00903 | Limonene and pinene degradation | 8 (0.86%) | 32 (0.28%) | |
| ko00904 | Diterpenoid biosynthesis | 8 (0.86%) | 32 (0.28%) | |
| ko00909 | Sesquiterpenoid and triterpenoid biosynthesis | 4 (0.43%) | 17 (0.15%) | |
| ko00906 | Carotenoid biosynthesis | 8 (0.86%) | 51 (0.45%) | |
| ko00905 | Brassinosteroid biosynthesis | 2 (0.22%) | 17 (0.15%) | |
| ko00900 | Terpenoid backbone biosynthesis | 9 (0.97%) | 117 (1.02%) | |
| Phenols | ko00940 | Phenylpropanoid biosynthesis | 64 (6.92%) | 317 (2.77%) |
| ko00380 | Tryptophan metabolism | 28 (3.03%) | 105 (0.92%) | |
| ko00350 | Tyrosine metabolism | 14 (1.51%) | 86 (0.75%) | |
| ko00360 | Phenylalanine metabolism | 9 (0.97%) | 84 (0.73%) | |
| ko00941 | Flavonoid biosynthesis | 9 (0.97%) | 91 (0.8%) | |
| ko00944 | Flavone and flavonol biosynthesis | 1 (0.11%) | 11 (0.1%) | |
| ko00400 | Phenylalanine, tyrosine and tryptophan biosynthesis | 6 (0.65%) | 89 (0.78%) | |
| Alkaloids | ko00950 | Isoquinoline alkaloid biosynthesis | 7 (0.76%) | 39 (0.34%) |
| ko00960 | Tropane, piperidine and pyridine alkaloid biosynthesis | 4 (0.43%) | 42 (0.37%) |