REAGENT or RESOURCE | SOURCE | IDENTIFIER |
---|---|---|
Chemicals, Peptides, and Recombinant Proteins | ||
Dsn1560-572 QQLLKGLSLSFSK |
Tufts University Core Facility | N/A |
FITC-Dsn1560-572 FITC-AHA-QQLLKGLSLSFSK |
Tufts University Core Facility | N/A |
Mtw1230-262 KDFRTRYIDIRTNNVLRKLGLLGDKEDEKQSAK |
Tufts University Core Facility | N/A |
FITC-Mtw1230-262 FITC-AHA-KDFRTRYIDIRTNNVLRKLGLLGDKEDEKQSAK |
Tufts University Core Facility | N/A |
Mtw1274-289 SIDIEEPQLDLLDDVL |
Tufts University Core Facility | N/A |
FITC-Mtw1274-289 FITC-AHA- SIDIEEPQLDLLDDVL |
Tufts University Core Facility | N/A |
FITC-Mif21-41 MDYMNLGVKSRKTGLTVNKTVQKDEYSMENLNDFFKDEQDS |
Tufts University Core Facility | N/A |
FITC-Ame11-25 MDALKQRHLKLLYRQRGSASRTIDY |
Tufts University Core Facility | N/A |
PEG 550 MME | Hampton Research | HR2-611 |
PGA-LM | Molecular Dimensions | MD2-250-108 |
Ethylmercurithiosalicylic acid, sodium salt Heavy Atom Screen M1 | Hampton Research | HR2-448 |
L(+)-Selenomethionine | Acros Organics | 3211-76-5 |
PEG 8000 | Sigma | 81268-1kg |
Tantalum Cluster Derivatization Kit | Jena Bioscience | PK-103 |
PEG 3000 | Rigaku | 1008057 |
Deposited Data | ||
Atomic coordinates, MIND-C1 structure | Protein Data Bank | PDB: 5T58 |
Atomic coordinates, MN-C2 structure | Protein Data Bank | PDB: 5T51 |
Atomic coordinates, MN-C2-Mif21-41 structure | Protein Data Bank | PDB: 5T59 |
Atomic coordinates, Spc24/Spc25-Dsn1560-572 structure | Protein Data Bank | PDB: 5T6J |
Experimental Models: Organisms/Strains | ||
E. coli Rosetta 2 (DE3) | EMD | #71400 |
Recombinant DNA | ||
pLIC_M42 H6-TEV- *MIND-C1 | This study | N/A |
pLIC_M147 H6-TEV- *MIND-C1:D205 | This study | N/A |
pLIC_M147_mut2 H6-TEV- *MIND-C1:D205-2D | This study | N/A |
pLIC_M142 H6-TEV- *MIND-C1:D367 | This study | N/A |
pLIC_M89 H6-TEV- *head I MN-C2 | This study | N/A |
pLIC_M89_mut4 H6-TEV- *head I Site II mut. Mtw1 N32A/Y36A/E73A/D77A |
This study | N/A |
pLIC_M89_mut5 H6-TEV- *head I Site III mut Nnf1 E76A/E83A |
This study | N/A |
pLIC_M110 H6-TEV- *head II D256 | This study | N/A |
pLIC_M100 H6-TEV- *head II D230 | This study | N/A |
pLIC_M136 H6-TEV- *head II D205 | This study | N/A |
pLIC_M136_mut2 H6-TEV- *head II D205-2D | This study | N/A |
pLIC_M107 H6-TEV- *head II D230L | This study | N/A |
pLIC_Mf6 H6-MBP-TEV- *Mif2-FL | This study | N/A |
pLIC_Mf3 H6-MBP-TEV- *Mif2 (1-41) | This study | N/A |
pLIC_C6 H6-GST-TEV- *Ame1 (1-24) | This study | N/A |
pLIC_S08 H6-TEV- *Spc24/Spc25 | This study | N/A |
pET30b-VHH3- *nanobody | This study | N/A |
Software and Algorithms | ||
XDS | (Kabsch, 2010) | xds.mpimfheidelberg.mpg.de |
SHELXD | (Sheldrick, 2010) | shelx.uniac.gwdg.de/SHELX/ |
SHARP | (Vonrhein, 2007) | www.globalphasing.com/sharp/ |
RESOLVE | (Terwilliger, 2000) | https://solve.lanl.gov/Resolve/resolve.html |
PHASER | (McCoy et al., 2007) | wwwstructmed.cimr.cam.ac.uk/phaser_obsolete/ |
PyMol | Schrödinger, LLC | www.pymol.org |
DMMULTI | (Cowtan, 1994) | www.ccp4.ac.uk/html/dmmulti.html |
PHENIX | (Adams et al., 2010) | www.phenix-online.org |
O | (Jones, 1991) | Xray.bmc.uu.se/alwyn/A-Z_of_O/AZ_frameset.html |
anisotropy server | (Strong, 2006) | https://services.mbi.ucla.edu/anisoscale/ |
Secondary structure prediction | (Yachdav et al., 2014) | www.predictprotein.org |
MolProbity | (Chen et al., 2010) | Molprobity.biochem.duke.edu |
Coot | (Emsley et al., 2010) | www2.mrclmb.cam.ac.uk/personal/pemsley/coot/ |
Prism7 | GraphPad | www.graphpad.com |
T-Coffee | (Notredame, 2000) | tcoffee.crg.cat |
matplotlib | (Hunter, 2007) | matplotlib.org |
ESPript | (Robert and Gouet, 2014) | espript.ibcp.fr/ESPript/ESPript/ |