Table 1.
Sample ID | Geographic origin | Date, y before present | Sequencing (source) | No. of mapped reads, million | Average coverage |
L. cyclotis_A | Central African Republic | Modern | This study (BI) | 906 | 27.78 |
L. africana_B | Kenya | Modern | This study (BI) | 1,001 | 30.44 |
L. africana_C | South Africa | Modern | This study (BI) | 1,114 | 33.42 |
E. maximus_D | Myanmar | Modern | This study (BI) | 1,283 | 38.94 |
E. maximus_E | Malaysia (Borneo) | Modern | This study (BI) | 1,107 | 32.20 |
L. cyclotis_F | Sierra Leone | Modern | This study (BI) | 1,074 | 32.06 |
M. primigenius_G | Taimyr Peninsula, Russia | ∼31,500 | This study (HMS) | 55 | 0.60 |
M. primigenius_H | Alaska, USA | ∼44,900 | This study (HMS) | 27 | 0.49 |
M. americanum_I | Alaska, USA | >50,000 | This study (IFT, HMS) | 399 | 3.96 |
E. maximus_L | India* | Modern | (13) | 889 | 27.02 |
E. maximus_M | India* | Modern | (13) | 1,014 | 30.27 |
P. antiquus_N | Germany | ∼120,000 | This study (BI, HMS) | 1,399 | 14.64 |
P. antiquus_O | Germany | ∼120,000 | (10) | 12 | 0.14 |
M. primigenius_P | Oimyakon, Russia | ∼44,800 | (12) | 902 | 12.77 |
M. primigenius_Q | Wrangel Island, Russia | ∼4,300 | (12) | 959 | 19.00 |
M. primigenius_S | Yamal Peninsula, Russia | ∼45,300 | This study (IFT, HMS) | 132 | 0.91 |
M. columbi_U | Wyoming, USA | ∼13,400 | This study (IFT, HMS) | 122 | 1.53 |
Mammuthus_V | Wyoming, USA | ∼42,400 | This study (IFT, HMS) | 830 | 5.86 |
M. americanum_X | Gulf of Maine, USA | ∼13,400 | This study (HMS) | 71 | 0.79 |
E. maximus_Y | Assam, India | Modern | (13) | 1,239 | 35.90 |
E. maximus_Z | Karnataka, India | Modern | (14) | 447 | 14.58 |
BI, Broad Institute; HMS, Harvard Medical School; IFT, Illumina Fast Track Services.
Exact geographic origin is unknown.