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. 2018 Feb 26;115(11):E2566–E2574. doi: 10.1073/pnas.1720554115

Table 1.

Proboscidean samples analyzed in this study

Sample ID Geographic origin Date, y before present Sequencing (source) No. of mapped reads, million Average coverage
L. cyclotis_A Central African Republic Modern This study (BI) 906 27.78
L. africana_B Kenya Modern This study (BI) 1,001 30.44
L. africana_C South Africa Modern This study (BI) 1,114 33.42
E. maximus_D Myanmar Modern This study (BI) 1,283 38.94
E. maximus_E Malaysia (Borneo) Modern This study (BI) 1,107 32.20
L. cyclotis_F Sierra Leone Modern This study (BI) 1,074 32.06
M. primigenius_G Taimyr Peninsula, Russia ∼31,500 This study (HMS) 55 0.60
M. primigenius_H Alaska, USA ∼44,900 This study (HMS) 27 0.49
M. americanum_I Alaska, USA >50,000 This study (IFT, HMS) 399 3.96
E. maximus_L India* Modern (13) 889 27.02
E. maximus_M India* Modern (13) 1,014 30.27
P. antiquus_N Germany ∼120,000 This study (BI, HMS) 1,399 14.64
P. antiquus_O Germany ∼120,000 (10) 12 0.14
M. primigenius_P Oimyakon, Russia ∼44,800 (12) 902 12.77
M. primigenius_Q Wrangel Island, Russia ∼4,300 (12) 959 19.00
M. primigenius_S Yamal Peninsula, Russia ∼45,300 This study (IFT, HMS) 132 0.91
M. columbi_U Wyoming, USA ∼13,400 This study (IFT, HMS) 122 1.53
Mammuthus_V Wyoming, USA ∼42,400 This study (IFT, HMS) 830 5.86
M. americanum_X Gulf of Maine, USA ∼13,400 This study (HMS) 71 0.79
E. maximus_Y Assam, India Modern (13) 1,239 35.90
E. maximus_Z Karnataka, India Modern (14) 447 14.58

BI, Broad Institute; HMS, Harvard Medical School; IFT, Illumina Fast Track Services.

*

Exact geographic origin is unknown.