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. Author manuscript; available in PMC: 2019 Mar 15.
Published in final edited form as: Mol Cell. 2018 Mar 8;69(6):1039–1045.e3. doi: 10.1016/j.molcel.2018.02.007

Figure 1. NHCC frequencies in CLING and in Hi-C.

Figure 1

(A) Intra-chromosomal interactions of FIRRE with DXZ4, or with a control locus at 101 Mb (*** p < 0.0001, Mann-Whitney rank-sum test). CLING-determined co-localization frequencies (each quantification in 100 RPE-1 nuclei), in comparison to Hi-C signals (resolution/bin size = 40 kb), or Hi-C normalized read numbers in RPE-1 cells. (B) NHCCs of FIRRE-ATF4 (58 %), and FIRRE-PGR (25 %) in CLING (each quantification in 100 RPE-1 nuclei) in comparison to Hi-C contact probabilities (resolution/bin size = 250 kb), or normalized read counts.