Table 1.
SNP ID | Context sequence [VIC/FAM] | Position |
---|---|---|
rs2069952 | GCACCCTCTCTGCACAGTCCCCTGA[C/T]CCTGACTGTCTATCCACAGTTCCTC | Intron 2 |
rs2069940 | GTTTCAAAAAGATTGCTTTAGGTAA[C/G]CAATCATCTTCTGAGATTTATACAG | 5′ UTR |
rs867186 | GCTGGTCCTGGGCGTCCTGGTGGGC[A/G]GTTTCATCATTGCTGGTGTGGCTGT | Exon 4 |
The first nucleotide in the brackets corresponds to the VIC allele and the second to the FAM allele. Oligonucleotide probes were purchased from Applied Biosystems
SNP single-nucleotide polymorphism, 5′UTR 5′ untranslated region