Tables 2. In total, 42 400 draft genomes, which passed all of the quality criteria from Table 1, were examined for the concordance of in silico serovar predictions with the reported serovar.
Category | SISTR | MLST |
---|---|---|
Type 0: Full match | 38 954 | 36 954 |
Type 1: Incorrect reported serovar | 2115 | 1804 |
Type 2: Serovar variant detected | 1305 | 891 |
Type 3: Incorrect predicted serovar | 26 | 462 |
Type 4: Untypeable | 0 | 2289 |