Table 2.
The effect of DNA levels on IC and stx2 detection.
Reaction | IC spikea | O157 spikeb | Total DNAc | IC expd | stx2 expe |
---|---|---|---|---|---|
1 | 0 | 0 | 100 ng | 0 | 0 |
2 | 0 | 2126 | 100 ng | 0 | 2720 |
3 | 276 | 0 | 100 ng | 72 | 0 |
4 | 276 | 2126 | 100 ng | 84 | 2795 |
5 | 0 | 0 | 1 μg | 0 | 0 |
6 | 0 | 2126 | 1 μg | 0 | 2740 |
7 | 276 | 0 | 1 μg | 78 | 0 |
8 | 276 | 2126 | 1 μg | 87 | 2705 |
IC spike level (molecules per reaction) based on known MW of the pHCred plasmid.
E. coli O157 (RM1484) genomic DNA, number of molecules/reaction, based on 5.1 × 106 bp.
DNA per reaction, primarily sediment DNA from a pathogen-negative sample.
IC template levels per reaction as detected by ddPCR, average of four experiments.
stx2 template levels per reaction as detected by ddPCR, average of four experiments.