Table 2.

Sequence data production from RNA-seq.

Condition	Sample ID	Clean reads	Clean bases (bp)	Read length (bp; R1&R2)	Q20 (%)
					Read 1	Read 2
pH 6.5 and 37°C	Cd1_rep1	20,236,810	2,023,681,000	100	98.54	97.86
	Cd1_rep2	20,268,110	2,026,811,000	100	99.14	97.83
	Cd1_rep3	20,167,946	2,016,794,600	100	99.11	97.89
pH 5.5 and 37°C	Cd2_rep1	22,527,592	2,252,759,200	100	99.06	97.29
	Cd2_rep2	22,539,134	2,253,913,400	100	99.02	97.12
	Cd2_rep3	20,228,350	2,022,835,000	100	99.12	97.84
pH 5.5 and 40°C	Cd3_rep1	20,113,284	2,011,328,400	100	99.13	98.04
	Cd3_rep2	20,255,118	2,025,511,800	100	99.11	97.82
	Cd3_rep3	20,185,884	2,018,588,400	100	99.09	97.61
pH 5.5 and 37°C with WPI	Cd4_rep1	22,502,782	2,250,278,200	100	99.02	96.82
	Cd4_rep2	20,240,064	2,024,006,400	100	99.13	97.92
	Cd4_rep3	22,534,968	2,253,496,800	100	98.99	97.14