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. 2018 Mar 20;19:11. doi: 10.1186/s40360-018-0201-x

Table 2.

Primers sequences used in direct qMSP

MiRNA gene Methylated primers Unmethylated primers Temperature (°C) Amplicon size (bp)
M U M U
miRNA-122 F:5′-TTGTTTTGAAAATTATTTTTTTGTTC-3′ F:5′-TTTTGAAAATTATTTTTTTGTTTGA-3′ 57.2 57.3 122 120
R:5′-CATCTACTCACCTAATCCACGAT-3′ R:5′-CCATCTACTCACCTAATCCACAAT-3′ 56.5 58.5
miRNA-125b F:5′-CGGTTAAAGTATAAATTATAGAGTTACGG-3′ F:5′-TGGTTAAAGTATAAATTATAGAGTTATGG-3′ 57.8 57.3 181 179
R:5′-ACTAACTACAAAACTTCCAAAAACG-3′ R:5′-TAACTACAAAACTTCCAAAAACACC-3′ 54.7 56.9
miRNA-106b F:5’-TCGGAAATTTATTTGGAAGTTTATC-3’ F:5′-TGGAAATTTATTTGGAAGTTTATTG-3’ 59.2 53.9 105 105
R:5’-GACAATCTACTTCAACTCCTCGAC-3’ R:5’-CAACAATCTACTTCAACTCCTCAAC-3’ 57.2 57.7