Table 2.
Assemblages of Giardia duodenalis and the distribution of bg, tpi and gdh sequences for each positive samples and multilocus characterization
| Chipmunk ID | Assemblage | GenBank ID | MLG type (n) | ||
|---|---|---|---|---|---|
| bg | tpi | gdh | |||
| CD26, CD27 | GI | GI | G | MF671919, MF671914, MF671912 | MLG G1 (2) |
| CD28 | GI | GII | G | MF671919, MF671913, MF671912 | MLG G2 (1) |
| CD79 | GII | GII | G | MF671920, MF671913, MF671912 | MLG G3 (1) |
| CD29, CD34, CD69 | AI | AV | AI-1 | MF671918, MF671915, MF671910 | MLG A1 (3) |
| CD60, CD119 | AI | AI | AI | MF671918, MF671916, MF671911 | MLG A2 (2) |
| CD61, CD96, CD124, CD144 | AI-1 | AV | AI | MF671917, MF671915, MF671911 | MLG A3 (4) |
| CD64 | AI | AV | AI | MF671918, MF671915, MF671911 | MLG A4 (1) |
| CD74, CD92, CD186 | AI | AI | Neg | MF671918, MF671916, – | – |
| CD81, CD203, CD211 | GII | Neg | Neg | MF671920, –, – | – |
| CD22, CD44, CD102 | GI | Neg | G | MF671919, –, MF671912 | – |
| CD23 | GI | Neg | Neg | MF671919, –, – | – |
Abbreviations: Neg no genotype determined; – GenBank accession numbers not available