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. 2017 Jun 5;33(20):3211–3219. doi: 10.1093/bioinformatics/btx325

Table 1.

Quantitative comparison of methods

Dataset Score Local K-Branches DPT TSCAN
Paul et al.a precision 0.77 0.67 0.61
recall 0.04 0.001 0.24
correct branchingb Yes Yes No
Guo et al. precision 0.96 1.0 0.6
recall 0.36 0.02 0.89
correct branchingb Yes Yes No
Kouno et al. precision 0.77 1.0 0.47
recall 0.4 0.012 0.43
correct branchingb Yes No No
a

Quantifying tip recall is problematic since ground truth is based on thresholding of FACS markers and hence recalls too many cells.

b

The number of branching events was identified correctly.