Table 1.
Impact of k-mer pattern on the hybrid score (best computed value of the product of cluster specificity and sensitivity) for 10 pairs of simulated data
| K-mer pattern | ||||||
|---|---|---|---|---|---|---|
| Species mix | 111 | 1111 | 11111 | 11001 | 110101 | 111001 |
| S.enterica in A.fumigatus | 0.39 | 0.79 | 0.94 | 0.45 | 0.93 | 0.97 |
| B.cereus in C.canadensis | 0.99 | 0.99 | 0.98 | 0.99 | 0.98 | 0.99 |
| B.mallei in H.sapiens | 1.00 | 0.99 | 0.99 | 0.99 | 0.99 | 0.99 |
| A.fulgidus in P.tetraurelia | 0.99 | 0.99 | 0.99 | 0.99 | 0.99 | 0.99 |
| A.fumigatus in P.tigris | 0.96 | 0.96 | 0.93 | 0.95 | 0.95 | 0.95 |
| G.intestinalis in X.tropicalis | 0.95 | 0.99 | 0.95 | 0.99 | 0.96 | 0.98 |
| S.enterica in T.vaginalis | 0.41 | 0.50 | 0.70 | 0.72 | 0.71 | 0.72 |
| B.cereus in A.australis | 0.73 | 0.73 | 0.71 | 0.72 | 0.71 | 0.72 |
| S.cerevisiae in T.vaginalis | 0.60 | 0.56 | 0.49 | 0.57 | 0.51 | 0.58 |
| S.pombe in T.vaginalis | 0.65 | 0.61 | 0.43 | 0.58 | 0.47 | 0.58 |
| Mean | 0.69 | 0.74 | 0.75 | 0.81 | 0.83 | 0.78 |
| Median | 0.73 | 0.79 | 0.93 | 0.95 | 0.95 | 0.95 |
| Min | 0.01 | 0.01 | 0.15 | 0.45 | 0.47 | 0.05 |
| Max | 1.00 | 0.99 | 0.99 | 0.99 | 0.99 | 0.99 |