Table 1.
An overview of the annotation databases in ConceptMetab
| Concept Type | No. of Concepts | Mean Size | Median Size | No. of Compounds |
|---|---|---|---|---|
| Enzyme | 175 | 11 | 7 | 874 |
| GOBP | 3712 | 56 | 20 | 1220 |
| GOCC | 346 | 117 | 19 | 1213 |
| GOMF | 864 | 48 | 14 | 1226 |
| KEGG Pathways | 74 | 42 | 38 | 2427 |
| MeSH Anatomy | 1506 | 357 | 208 | 37 706 |
| MeSH Diseases | 4089 | 182 | 105 | 33 074 |
| MeSH Organisms | 3011 | 150 | 58 | 48 688 |
| MeSH Phen and Proc | 1443 | 404 | 195 | 43 016 |
| MeSH Psy and Psy | 519 | 180 | 79 | 9188 |
| MeSH Tech | 330 | 280 | 198 | 15 721 |
The number of biological concepts, the mean and median number of compounds in them, and the number of unique compounds across all concepts in each concept type are given.