Table 2.
Summary of threshold-based results for the DAMPD benchmark dataset
| Tool | TP | FP | FN | TN | Total | Sens (%) | Spec (%) | Prec (%) | Bal Acc (%) |
|---|---|---|---|---|---|---|---|---|---|
| CAMPR3(RF) | 505 | 748 | 42 | 1987 | 3282 | 92.32 | 72.65 | 40.30 | 82.49 |
| CAMPR3(SVM) | 493 | 763 | 54 | 1972 | 3282 | 90.13 | 72.10 | 39.25 | 81.11 |
| ADAM | 460 | 851 | 87 | 1884 | 3282 | 84.09 | 68.88 | 35.09 | 76.49 |
| MLAMP | 348 | 485 | 199 | 2250 | 3282 | 63.62 | 82.27 | 41.78 | 72.94 |
| DBAASP | 121 | 195 | 426 | 2540 | 3282 | 22.12 | 92.87 | 38.28 | 57.49 |
| AMPA | 267 | 416 | 280 | 2319 | 3282 | 48.81 | 84.79 | 39.09 | 66.80 |
| AntiBP | 281 | 860 | 32 | 705 | 1878 | 89.78 | 45.05 | 24.63 | 67.41 |
| AntiBP2 | 272 | 1315 | 41 | 250 | 1878 | 86.90 | 15.97 | 17.14 | 51.44 |
| BAGEL3 | 29 | 0 | 2 | 155 | 186 | 93.55 | 100.0 | 100.0 | 96.77 |
| BACTIBASE | 26 | 0 | 5 | 155 | 186 | 83.87 | 100.0 | 100.0 | 91.93 |