Table 8. LAMA3 promoter regions harboring binding sites of p53.
| Frequency (random expectancy x 10–3) | |||||||
|---|---|---|---|---|---|---|---|
| Promoter | TXN bound | Start nt from TSS | End nt from TSS | String | Dissimilarity (%) | Equally | Query |
| LAMA3 | p53 | −4245 | −4239 | TGAGCCC | 8.8 | 2 × 10–3 | 2 × 10–3 |
| −4143 | −4137 | GGGCAGA | 1.7 | 9 × 10–4 | 8 × 10–4 | ||
| −4063 | −4057 | TCTGCCC | 1.7 | 9 × 10–4 | 8 × 10–4 | ||
| −3597 | −3591 | GGTGCCC | 4 | 1 × 10–3 | 1 × 10–3 | ||
| −3585 | −3579 | CACGCCC | 3.3 | 1 × 10–3 | 1 × 10–3 | ||
| −3451 | −3445 | GGCGCCC | 7.4 | 1 × 10–3 | 1 × 10–3 | ||
| 813 | 819 | ACTGCCC | 3.5 | 1 × 10–3 | 1 × 10–3 | ||
| −4547 | −4541 | CTTGCCC | 0.2 | 9 × 10–4 | 7 × 10–4 | ||
| −3094 | −3088 | TGAGCC | 6.7 | 2 × 10–3 | 2 × 10–3 | ||
| −2804 | −2798 | CACGCCC | 3.3 | 1 × 10–3 | 1 × 10–3 | ||
| −2718 | −2712 | TCTGCCC | 1.7 | 9 × 10–4 | 8 × 10–4 | ||
| −2347 | −2341 | CCAGCCC | 3.7 | 1 × 10–3 | 1 × 10–3 | ||
| −2328 | −2322 | GGGCTCT | 8.5 | 3 × 10–4 | 2 × 10–4 | ||
| −1914 | −1908 | GTCGCCC | 6.4 | 1 × 10–3 | 1 × 10–3 | ||
| −1798 | −1792 | ACCGCCC | 6.8 | 2 × 10–3 | 2 × 10–3 | ||
| −948 | −942 | GTCGCCC | 6.4 | 1 × 10–3 | 9 × 10–4 | ||
| −437 | −431 | TCTGCCC | 1.7 | 9 × 10–4 | 8 × 10–4 | ||
| −420 | −414 | GGGCGGC | 6.1 | 1 × 10–3 | 1 × 10–3 | ||
| −374 | −368 | GGGCGGC | 3.5 | 1 × 10–3 | 1 × 10–3 | ||
| −355 | −349 | GGGCGCG | 4.6 | 6 × 10–4 | 4 × 10–4 | ||
| −342 | −336 | CTGGCCC | 4.3 | 6 × 10–4 | 4 × 10–4 | ||
| −325 | −319 | GGGCCGC | 6.9 | 2 × 10–3 | 2 × 10–3 | ||
| −314 | −308 | GGGCGGG | 3.3 | 1 × 10–3 | 1 × 10–3 | ||
| −310 | −304 | GGGCAGG | 0 | 9 × 10–4 | 7 × 10–4 | ||
| −296 | −290 | GGGCACA | 3 | 1 × 10–3 | 1 × 10–3 | ||
| −256 | −250 | GCAGCCC | 6.5 | 1 × 10–3 | 9 × 10–4 | ||
| −236 | −230 | TCAGCCC | 5.5 | 1 × 10–3 | 1 × 10–3 | ||
| −223 | −217 | TCTGCCC | 1.7 | 9 × 10–4 | 8 × 10–4 | ||
| −183 | −177 | TCAGCCC | 5.5 | 1 × 10–3 | 1 × 10–3 | ||
| −1127 | −1121 | GGGCGCC | 7.4 | 1 × 10–3 | 1 × 10–3 | ||
| −126 | −120 | GGCGCCC | 7.4 | 1 × 10–3 | 1 × 10–3 | ||
| −96 | −90 | GGGCCAA | 6 | 1 × 10–3 | 1 × 10–3 | ||
| −85 | −79 | GGGCGGG | 3.3 | 1 × 10–3 | 1 × 10–3 | ||
| −75 | −69 | GGGCGGG | 3.3 | 1 × 10–3 | 1 × 10–3 | ||
| −70 | −64 | GGGCGGG | 3.3 | 1 × 10–3 | 1 × 10–3 | ||
| −65 | −59 | GGGCGCA | 6.4 | 1 × 10–3 | 1 × 10–3 | ||
| −40 | −34 | GGGCGGC | 6.1 | 1 × 10–3 | 1 × 10–3 | ||
| −24 | −18 | GGGCGGC | 6.1 | 1 × 10–3 | 1 × 10–3 | ||
| 1 | 7 | GGGCCAG | 4.3 | 6 × 10–4 | 4 × 10–4 | ||
| 7 | 13 | GGGCAGC | 2.8 | 1 × 10–3 | 1 × 10–3 | ||
| 45 | 51 | GGGCGCG | 4.6 | 6 × 10–4 | 4 × 10–4 | ||
| 101 | 107 | GGGCGTG | 3.3 | 1 × 10–3 | 1 × 10–3 | ||
| 155 | 161 | TGAGCCC | 6.7 | 2 × 10–3 | 2 × 10–3 | ||
| 160 | 166 | CCGGCCC | 4.1 | 1 × 10–3 | 1 × 10–3 | ||
| 216 | 222 | GGGCGGG | 3.3 | 1 × 10–3 | 1 × 10–3 | ||
| 200 | 206 | GGGCGGG | 3.3 | 1 × 10–3 | 1 × 10–3 | ||
| 206 | 212 | GGGCGGC | 6.1 | 1 × 10–3 | 1 × 10–3 | ||
| 220 | 226 | AAAGCCC | 7.2 | 1 × 10–3 | 1 × 10–3 | ||
| 236 | 242 | GGGCTGC | 6.5 | 1 × 10–3 | 1 × 10–3 | ||
| 251 | 257 | GGGCGCG | 4.6 | 6 × 10–4 | 4 × 10–4 | ||