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. 2018 Feb 9;9(17):13713–13732. doi: 10.18632/oncotarget.24459

Table 4. Amino acid residues of NKX2.5 and GATA4 present in cutoff value 8.0 Å (cut off taken through pymol).

MOTIFs NKX2.5 GATA4
Residues PI MT PTM Residues PI MT PTM
Binding Region 2(BR2) I255
V14 K256
K15 K15 K 15 I P257
D16 D16 D 16 N Q258 Q258
I17 R259 R259
L18 R260 R260 R260Q
N19 N19 N19S L261 L261P
L20 S262 S262
E21 E 21 Q A263
Q22 Q22 Q 22 K/P/R S264 S264
Q23 R265
Q24 R265 R 265 TER*
Binding Region 1(BR1) R25 R25 R 25 C N239 N239D
S26 A240
L27 C241
A28 G242
A29 L243
A30 Y244 Y244 Y244C Y244
G31 H245
E32 E32 E 32 K K246
L33 M247 M247T
S34 N248 N248S
A35 G249
R36 R36 R 36 S I250
L37 N251
E38 R252 R252 R252P
A39 P253
T40 L254
I255 I255T

Residues participated in direct polar interaction, mutations, and PTM localize in the interaction zone are listed. PI = Polar Interactions, MT = Mutations. Bold amino acids are those, which are identified by this work.