Fig. 5.

The distribution of plasmid types shown on the transposon phylogeny. Maximum parsimony tree (homoplastic sites removed, midpoint rooted, as in Fig. 4) based on the composite transposon alignment for 172 sequences containing a plasmid replicon on the same contig i.e. those with an assigned plasmid type (color). IncI2 and IncX4 are the most common plasmid types. An example sequence ID is shown for each unique sequence