Skip to main content
. 2018 Mar 21;8:4929. doi: 10.1038/s41598-018-23406-2

Table 1.

The most abundant bacterial OTUs in cucumber rhizosphere soils treated with water (W) or vanillic acid at 0.05 μmol g−1 soil (VA). OTUs were delineated at 97% sequence similarity. Only OTUs with average relative abundances >0.5% in at least one treatment were presented. Values were expressed as mean ± standard error (n = 3). OTU ID in bold indicates its relative abundance was significant different between treatments according to Welch’s t test (P < 0.05, Bonferroni corrected).

OTU ID Phylum Class Genus Relative abundances (%)
W VA
OTU1259 Proteobacteria Gammaproteobacteria Acidibacter 1.75 ± 0.24 3.72 ± 0.52
OTU394 Firmicutes Clostridia Clostridium sensu stricto 1 3.14 ± 0.47 1.40 ± 0.52
OTU1239 Proteobacteria Gammaproteobacteria Panacagrimonas 1.99 ± 0.73 2.09 ± 0.11
OTU1472 Proteobacteria Gammaproteobacteria Steroidobacter 1.37 ± 0.13 1.89 ± 0.12
OTU725 Acidobacteria Acidobacteria Acidobacteria norank 2.16 ± 0.12 0.91 ± 0.36
OTU429 Firmicutes Clostridia Terrisporobacter 2.18 ± 0.24 0.85 ± 0.55
OTU1435 Firmicutes Clostridia Clostridium sensu stricto 1 1.34 ± 0.13 0.80 ± 0.09
OTU750 Acidobacteria Acidobacteria Acidobacteria unclassified 1.08 ± 0.06 1.05 ± 0.05
OTU914 Bacteroidetes Cytophagia Cytophagaceae norank 0.99 ± 0.02 0.97 ± 0.01
OTU1125 Actinobacteria Actinobacteria Pseudarthrobacter 1.15 ± 0.15 0.76 ± 0.06
OTU906 Firmicutes Clostridia Peptostreptococcaceae unclassified 1.37 ± 0.20 0.49 ± 0.37
OTU631 Acidobacteria Acidobacteria Acidobacteria unclassified 0.93 ± 0.03 0.79 ± 0.03
OTU1545 Firmicutes Clostridia Clostridium sensu stricto 1 1.05 ± 0.16 0.47 ± 0.17
OTU654 Acidobacteria Acidobacteria Acidobacteria norank 0.96 ± 0.06 0.54 ± 0.11
OTU1754 Proteobacteria Betaproteobacteria Nitrosomonadaceae norank 0.51 ± 0.04 0.97 ± 0.10
OTU1955 Proteobacteria Gammaproteobacteria Luteimonas 0.59 ± 0.05 0.74 ± 0.03
OTU301 Actinobacteria Actinobacteria Aeromicrobium 0.50 ± 0.09 0.74 ± 0.11
OTU690 Proteobacteria Deltaproteobacteria Archangium 0.68 ± 0.03 0.56 ± 0.05
OTU1324 Acidobacteria Acidobacteria Subgroup 7 norank 0.42 ± 0.08 0.78 ± 0.11
OTU1210 Proteobacteria Gammaproteobacteria Thermomonas 0.63 ± 0.02 0.55 ± 0.04
OTU665 Chloroflexi Anaerolineae Anaerolineaceae norank 0.56 ± 0.01 0.52 ± 0.01
OTU1321 Acidobacteria Acidobacteria Acidobacteria norank 0.49 ± 0.04 0.58 ± 0.08
OTU148 Proteobacteria Betaproteobacteria Piscinibacter 0.68 ± 0.04 0.38 ± 0.13
OTU924 Firmicutes Erysipelotrichia Turicibacter 0.90 ± 0.11 0.17 ± 0.28
OTU1691 Proteobacteria Betaproteobacteria SC-I-84 norank 0.68 ± 0.03 0.37 ± 0.14
OTU1282 Proteobacteria Betaproteobacteria Nitrosomonadaceae norank 0.45 ± 0.03 0.57 ± 0.05
OTU1127 Actinobacteria Actinobacteria Marmoricola 0.42 ± 0.09 0.59 ± 0.09
OTU1074 Bacteroidetes Cytophagia Cytophagaceae norank 0.45 ± 0.04 0.56 ± 0.05
OTU660 Proteobacteria Deltaproteobacteria BIrii41 norank 0.37 ± 0.04 0.60 ± 0.05
OTU1983 Acidobacteria Acidobacteria Acidobacteria norank 0.57 ± 0.01 0.39 ± 0.05
OTU156 Proteobacteria Alphaproteobacteria Bradyrhizobium 0.41 ± 0.03 0.53 ± 0.03
OTU1649 Actinobacteria Actinobacteria Microlunatus 0.53 ± 0.07 0.39 ± 0.04
OTU1913 Proteobacteria Gammaproteobacteria Steroidobacter 0.36 ± 0.03 0.53 ± 0.06
OTU1140 Actinobacteria Actinobacteria Blastococcus 0.51 ± 0.03 0.36 ± 0.08
OTU704 Acidobacteria Acidobacteria Acidobacteria norank 0.53 ± 0.03 0.32 ± 0.05
OTU168 Acidobacteria Acidobacteria Bryobacter 0.58 ± 0.02 0.24 ± 0.11