Figure 3.

Profiling of Additional Yeast Transcription Factors and CTCF from mESCs by SLIM-ChIP

(A) Genome browser view of Abf1 and Rap1 binding. For each of the factors, a motif logo was generated from called peaks locations. See also Figure S3.

(B) Genome browser view comparing the CTCF-binding profile for SLIM-ChIP and Cheng et al. (2014). The motif logo for Cheng et al. was generated according to the peaks called in the original manuscript.

(C) The un-normalized coverage of CTCF ChIP signal around CTCF peaks is shown.

(D) The protection landscape around CTCF-binding peaks (as in Figure 2G).