Official websites use .gov
A
.gov website belongs to an official
government organization in the United States.
Secure .gov websites use HTTPS
A lock (
) or https:// means you've safely
connected to the .gov website. Share sensitive
information only on official, secure websites.
Set of parameters used in BLASTP and hcluster_sg to compare results
| Parameter set | |||||||
|---|---|---|---|---|---|---|---|
| Tool | Parameter | A | B | C | D | E | F |
| BLASTP | Expectation value cutoff | 1e-03 | 1e-03 | 1e-03 | 1e-10 | 1e-10 | 1e-10 |
| Query coverage per hsp | 0 | 0 | 90 | 0 | 0 | 90 | |
| hcluster_sg | Minimum edge weight | 0 | 20 | 0 | 0 | 20 | 20 |
| Minimum edge density between a join | 0.34 | 0.50 | 0.34 | 0.34 | 0.50 | 0.50 | |
BLASTP was configured with maximum number of HSPs set to 1, and hcluster_sg with single link clusters set to “no” and maximum size set to 500.
