Table 1.
GENE | Chr location | rs # | Literature cited | Genotyping technique | Call Rate | Allele (minor/major) | MAF | HWE p-value |
---|---|---|---|---|---|---|---|---|
ADRB2 | 5 | rs1042713 | [19] | iPLEX | 0.962 | A/G | 0.432 | 0.566 |
HLA-G | 6 | rs1063320 | [20] | Taqman | 0.993 | C/G | 0.257 | 0.090 |
NOS3 | 7 | rs1799983 | [21] | iPLEX | 0.969 | T/G | 0.185 | 0.655 |
NOS3 | 7 | rs1800779 | [22] | iPLEX | 0.964 | G/A | 0.197 | 0.233 |
FCER1B | 11 | rs2583476 | [23] | iPLEX | 0.966 | C/T | 0.480 | 0.191 |
NOS1 | 12 | rs2682826 | [24] | iPLEX | 0.968 | T/C | 0.292 | 0.327 |
ORMDL3 | 17 | rs11650680 | [25, 26] | iPLEX | 0.969 | T/C | 0.220 | 0.602 |
GSDMA | 17 | rs3894194 | [27] | iPLEX | 0.955 | T/C | 0.491 | 0.767 |
ORMDL3 | 17 | rs7216389 | [26] | Taqman | 0.901 | C/T | 0.413 | 0.199 |
ORMDL3 | 17 | rs8079416 | [27] | iPLEX | 0.958 | T/C | 0.486 | 0.775 |
TBXA2R | 19 | rs1131882 | [28] | iPLEX | 0.964 | A/G | 0.188 | 0.247 |
TFGB1 a | 19 | rs1800469 | [29] | iPLEX | 0.957 | T/C | 0.353 | 0.022 |
TBXA2R | 19 | rs4523 | [30, 31] | iPLEX | 0.955 | C/T | 0.480 | 0.380 |
ADAM33 | 20 | rs2280091 | [32] | iPLEX | 0.944 | G/A | 0.192 | 0.060 |
ADAM33 | 20 | rs528557 | [11, 33] | iPLEX | 0.908 | G/C | 0.393 | 0.163 |
ADAM33 | 20 | rs543749 | [11] | iPLEX | 0.940 | T/G | 0.189 | 0.334 |
MAF minor allele frequency, HWE Hardy-Weinberg equilibrium
aSNP not in HWE so excluded from further analysis