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. 2018 Mar 22;4:4. doi: 10.1186/s40733-018-0039-4

Table 1.

Single Nucleotide Polymorphisms (SNPs) genotyped in asthma patients

GENE Chr location rs # Literature cited Genotyping technique Call Rate Allele (minor/major) MAF HWE
p-value
ADRB2 5 rs1042713 [19] iPLEX 0.962 A/G 0.432 0.566
HLA-G 6 rs1063320 [20] Taqman 0.993 C/G 0.257 0.090
NOS3 7 rs1799983 [21] iPLEX 0.969 T/G 0.185 0.655
NOS3 7 rs1800779 [22] iPLEX 0.964 G/A 0.197 0.233
FCER1B 11 rs2583476 [23] iPLEX 0.966 C/T 0.480 0.191
NOS1 12 rs2682826 [24] iPLEX 0.968 T/C 0.292 0.327
ORMDL3 17 rs11650680 [25, 26] iPLEX 0.969 T/C 0.220 0.602
GSDMA 17 rs3894194 [27] iPLEX 0.955 T/C 0.491 0.767
ORMDL3 17 rs7216389 [26] Taqman 0.901 C/T 0.413 0.199
ORMDL3 17 rs8079416 [27] iPLEX 0.958 T/C 0.486 0.775
TBXA2R 19 rs1131882 [28] iPLEX 0.964 A/G 0.188 0.247
TFGB1 a 19 rs1800469 [29] iPLEX 0.957 T/C 0.353 0.022
TBXA2R 19 rs4523 [30, 31] iPLEX 0.955 C/T 0.480 0.380
ADAM33 20 rs2280091 [32] iPLEX 0.944 G/A 0.192 0.060
ADAM33 20 rs528557 [11, 33] iPLEX 0.908 G/C 0.393 0.163
ADAM33 20 rs543749 [11] iPLEX 0.940 T/G 0.189 0.334

MAF minor allele frequency, HWE Hardy-Weinberg equilibrium

aSNP not in HWE so excluded from further analysis