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. 2018 Jan 26;12(3):681–691. doi: 10.1038/s41396-017-0030-8

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© International Society for Microbial Ecology 2018

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 4 — Schematic representation of the different types of gene cassette arrays found throughout CL1-bearing bacteria. CL1s with 100 % sequence nucleotide identity between identified features were grouped, with N = the number of isolates recovered carrying the specified gene cassette array. C1–C8 refer to clinical CL1s. A1–A10 refer to atypical CL1s. Recombination sites (attC and attI) are denoted by grey boxes. All sequences of CL1s have been submitted to Genbank (Accession MF686098-MF686115).