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. Author manuscript; available in PMC: 2018 Mar 22.
Published in final edited form as: J Proteome Res. 2017 Oct 10;16(12):4299–4310. doi: 10.1021/acs.jproteome.7b00467

Figure 2.

Figure 2

Progression of the number of canonical proteins (using HPP Guidelines metrics) of historical Plasma PeptideAtlas builds. Builds since 2009 (in blue) do not contain N-glycosylation enriched datasets and were thresholded at a ~1% protein-level FDR prior to application of guideline 15 requirements. Builds prior to 2009 (in orange) contain N-glycosylation enriched datasets and were thresholded at a distinct peptide probability ≥ 0.9 prior to application of guideline 15 requirements.