Table 5.
Clonal strain identity in families determined using qPCR biprobe and sequencing data.
| Family | Mother | Father | C1 | C2 | C3 | C4 | C5 | C6 | C7 |
|---|---|---|---|---|---|---|---|---|---|
| 12 | |||||||||
| Age | 60 | 61 | 31 | 28 | 27 | 26 | 24 | 22 | 19* |
| Strain ID | 1A | 1B | 1C,1D | 1E | 1E | 1E | 1E | 1E | 1E |
| 193 | |||||||||
| Age | 62 | 61 | 31 | 26 | 19* | ||||
| Strain ID | 2A, 2B, 2C, 2D | 2E, 2F | 2A | 2A, 2G | 2A, 2H | ||||
| 278 | |||||||||
| Age | 52 | 51 | 20 | 19* | 16 | ||||
| Strain ID | 3A | 3B | 3A,3C, 3D | 3A | 3A, 3E, 3F | ||||
| 70 | |||||||||
| Age | 53 | 55 | 32 | 27 | 25 | 19* | |||
| Strain ID | RX | 4A, 4B | 4C | 4D | RX | 4E,4F | |||
| 36 | |||||||||
| Age | 50 | 50 | 22 | 18* | |||||
| Strain ID | Neg | 5A | 5A, 5B | 5C | |||||
| 16 | |||||||||
| Age | 43 | 25 | 22 | 19* | |||||
| Strain ID | 6A | 6A | 6B | 6A | |||||
| 24 | |||||||||
| Age | 40 | 20* | |||||||
| Strain ID | 7A | 7A, 7B, 7C | |||||||
| 45 | |||||||||
| Age | 61 | 57 | 21 | 20* | 14 | ||||
| Strain ID | 8A | RX | Neg | 8A, 8B | 8A | ||||
| 23 | |||||||||
| Age | 42 | 23 | 19* | 16 | |||||
| Strain ID | 9A | 9B | 9C, 9D | 9E, 9F | |||||
| 240 | |||||||||
| Age | 52 | 60 | 19* | 18 | |||||
| Strain ID | 10A, 10B | RX | 10C, 10D, 10E | 10C, 10F | |||||
| 19 | |||||||||
| Age | 47 | 27 | 19* | ||||||
| Strain ID | 11A | 11B | 11C | ||||||
| 35 | |||||||||
| Age | 44 | 19* | 18 | 5 | |||||
| Strain ID | 12A, 12B | 12C, 12D, 12E | Neg | Neg | |||||
| 83 | |||||||||
| Age | 42 | 19* | 14 | 14 | 9 | ||||
| Strain ID | 13A | 13A, 13B | Neg | 13A | Neg | ||||
*Index child, Rx individual treated for H. pylori infection. C1, C2 etc = Child 1, Child 2 etc