Table 1. Barriers for Nonenzymatic Deprotonation of GAP, and for the TIM-Catalyzed Deprotonation of GAP, GA, and GA·HPi, at 25 °Ca.
Substrate | kcat (s–1)b | kcat/KM (M–1 s–1)b | ΔG‡exp (kcal·mol–1)c | ΔG‡calc (kcal·mol–1)c | ΔG0calc (kcal·mol–1)c |
---|---|---|---|---|---|
CH3CH2CO2–+ GAPd | N.A. | N.A. | 24.0 | 24.1 ± 0.2 | 16.1 ± 0.2 |
GA | N.A. | 0.07 | N.A. | 15.0 ± 2.4 | 6.0 ± 2.8 |
GA·HPi | N.A. | 64 | N.A. | 15.5 ± 3.5 | 4.8 ± 4.2 |
GAP | 2100 | 8.4 × 106 | 12.9 | 12.9 ± 0.8 | 2.5 ± 0.9 |
N.A., not available.
Kinetic parameters from ref (11).
The calculated activation or reaction free energies were obtained as averages and standard deviations over 30 independent EVB trajectories, as described in the Supporting Information. The standard error of the mean (s.e.m.) is ≤0.8 kcal·mol–1 and <0.2 kcal·mol–1 for the reactions of the pieces, and whole substrate, respectively. The experimental activation free energies, ΔG‡exp, were obtained from kcat using transition state theory.