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. 2018 Mar 20;9(3):171. doi: 10.3390/genes9030171

Table 1.

Listeria monocytogenes strains sequenced in this study.

Isolate Genbank Accession Number ST 1 CC 2 Lineage Serotype Year of Isolation Sample Type Pulsotype
MQ130026 MUZG00000000 ST-1 CC1 I 4b 2013 Blood P2 *
L970 PJJD00000000 ST-1 CC1 I 4b 2013 Food production ** P2 *
MQ130029 MVED00000000 ST-1 CC1 I 4b 2013 CSF 3 P2 *
MQ130032 MVEE00000000 ST-1 CC1 I 4b 2013 Blood P2 *
MQ130042 MVEG00000000 ST-1 CC1 I 4b 2013 Pleural Swab P1 *
MQ140025 MVEK00000000 ST-1 CC1 I 4b 2014 Ear Swab P68
MQ140031 MVEN00000000 ST-1 CC1 I 4b 2014 Blood P2 *
MQ140033 MVEP00000000 ST-1 CC1 I 4b 2014 Blood P1 *
L2113 PJJE00000000 ST-1 CC1 I 4b 2015 Food production P2 *
MQ150012 MVEY00000000 ST-6 CC6 I 4b 2015 Blood P13 *
MQ150005 MVEU00000000 ST-6 CC6 I 4b 2015 Blood P13 *
MQ130058 MVEH00000000 ST-6 CC6 I 4b 2013 Blood P13 *
MQ140030 MVEM00000000 ST-4 CC4 I 4b 2014 CSF 3 NC 4
MQ150004 MVET00000000 ST-54 CC54 I 4b 2015 Placental Swab P6 *
MQ130033 MVEF00000000 ST-54 CC54 I 4b 2013 Blood P12
L2259 PJJF00000000 ST-54 CC54 I 4b 2015 Food production P6 *
MQ150013 MVEZ00000000 ST-2 CC2 I 4b 2015 Blood P16 *
MQ130037 MVFA00000000 ST-18 CC18 II 1/2a 2013 Blood P32 *
MQ150011 MVEX00000000 ST-20 CC20 II 1/2a 2015 Nasal Swab NC
MQ150001 MVES00000000 ST-37 CC37 II 1/2a 2015 Blood P32 *
MQ140029 MVEL00000000 ST-7 CC7 II 1/2a 2014 Blood P31 *
L1445 PJJG00000000 ST-7 CC7 II 1/2a 2014 Food production P31 *
L1976 PJJI00000000 ST-8 CC8 II 1/2c 2015 Food production P48 *
MQ140034 MVEQ00000000 ST-121 CC121 II 1/2a 2014 Blood—Mother/Infant P59 *
L2256 PJJH00000000 ST-121 CC121 II 1/2c 2015 Food production P59 *
MQ140035 MVER00000000 ST-121 CC121 II 1/2a 2014 Ear Swab—Mother/Infant P59 *
MQ140032 MVEO00000000 ST-425 CC90 II 1/2a 2014 Blood NC
MQ140012 MVEJ00000000 ST-101 CC101 II 1/2a 2014 Blood—Mother/Infant P30
MQ140011 MVEI00000000 ST-101 CC101 II 1/2a 2014 Placental Surface Swab—Mother/Infant P30
MQ150008 MVEW00000000 ST-431 CC101 II 1/2a 2015 Blood P30
MQ150007 MVEV00000000 ST-431 CC101 II 1/2a 2015 CSF 3 P30

1 Sequence Type; 2 Clonal Complex; 3 Cerebrospinal fluid; 4 NC = not classified; * Indicates pulsotypes associated with persistence in the food processing environment in a 3 year study of Irish foods and food production facilities [21]; ** These samples are from food or food production environments (non-clinical) and were chosen for sequencing based upon pulsed-field gel electrophoresis (PFGE) similarities to clinical isolates (see text).