Table 1.
Potential RTA consensus binding sequences located in other promoters
| Seed sequence | Location | Orientation | Downstream gene | CDS | Putative function |
|---|---|---|---|---|---|
| ggttaacc | 54232–54239 | F | ORF34 | 54675–55658 | EBV BGLF3-like protein |
| 96861–96868 | R | ORF59 | 95549–96739 | processivity factor | |
| ggataacc | 51065–51072 | F | ORF32 | 51404–52768 | EBV BGLF1-like protein |
| 19042–19049 | R | ORF2 | 17921–18553 | DHFR-like protein | |
| ggctaacc | 28604–28611 | F | PAN | / | nut-1 RNA |
| 69231–69238 | R | ORF45 | 67353–68576 | acidic domain transactivation | |
| 118842–118849 | R | K12 | 117919–118101 | kaposin | |
| gggtaacc | 55218–55225 | R | 29a | 53738–54676 | similar to packaging protein |