Folding of fragmented E. coli tRNAMet.
(A) Secondary structure of tRNAMet with a
break between positions 56 and 57 in the phosphodiester backbone is
indicated by the arrow. (B) Folding of fragmented
tRNAMet is monitored with nondenaturing PAGE. Lanes:
tRNAMet, E. coli tRNAMet; RNA
57–76, unsubstituted smaller RNA fragment; 2′-O-me 57–76, fully
2′-O-methyl substituted smaller fragment. (+) and (−) indicate
presence and absence, respectively, of the 5′ large fragment (positions
1–56). Mobility of the folded tRNAMet, 5′ large fragment,
and 3′ small fragment are indicated on the right.