Table 3.
No. | Protein/(Gene) | Sequence used to design primers | Primer | Sequence (5′-3′) | Amplicon length (bp) |
---|---|---|---|---|---|
1 | Adhesion lipoprotein(Spr0906) | AE007317.1*: nt891426 to nt892361 | spr0906- sense | TATAGATCTGGTGACTTGAATGATGTTCGG | 717 |
spr0906- antisense | TTTGTCGACGGTCTTGTCATTTTGTGGGTC | ||||
2 | Hypothetical protein(spr1730) | AE007317.1*: ntc1708366 to nt1707692 | spr1730- sense | TATGGATCCGGGAATTTTGGAATTCCTTCT | 597 |
spr1730- antisense | TTTGTCGACTTCCAACTTCCCAAAAGCCAC | ||||
3 | LPXTG-motif cell wall anchor protein(spr0440) | AE007317.1*: nt441113 to nt446092 | spr0440- sense | TATGGATCCGCAGGTCACCGTAACGGGGTT | 2238 |
spr0440- antisense | TTTGTCGACTGCTAGGTCTCCTCCAACTTCGCT | ||||
4 | Hypothetical protein (spr0777) |
AE007317.1*: nt771852 to nt772961 | spr0777- sense | TATGGATCCGGTGTTGTCTATCTCTTACCTATTTTG | 216 |
spr0777- antisense | TTTGTCGACCCCCACACTATTTGATACGCT | ||||
5 | Pneumococcal histidine triad protein A (Spr1061) |
AE007317.1*: ntc1059416 to nt1056930 | spr1061- sense | TATGGATCCGAGTTGGGACTGTATCAAGCT | 2367 |
spr1061- antisense | TTTGTCGACACTTACAGATGAAGGATTACTTCC |
*Shows Genbank accession number followed by nucleotide positions spanning the gene. Restriction sites are depicted with underlined nucleotides. AGATCT – BglII, GGATCC – BamHI and GTCGAC – SalI.