TABLE 1.
Flock | No. of sheep examined | No. of sheep sampled | No. of feet sampled | Culture based serogrouping (pure cultures) |
Culture independent serogrouping (lesion swabs) |
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---|---|---|---|---|---|---|---|---|---|---|---|
Slide agglutination |
fimA PCR |
fimA PCR on mSTM swabs |
fimA PCR on LB swabs |
||||||||
No. of isolates tested | Serogroup(s) detected | No. of isolates tested | Serogroup(s) detected | No. of swabs tested | Serogroup(s) detected | No. of swabs tested | Serogroup(s) detected | ||||
1 | 51 | 24 | 24 | 25 | A, (D), (G) | 25 | A | 24 | A | 24 | A |
2 | 52 | 42 | 50 | 46 | A, B, H, I, (D), (F), (G) | 36 | A, B, H, I | 50 | A, B, G, H, I | 50 | A, B, G, H, I |
3 | 42 | 20 | 20 | 36 | C, D, E, G, I, (H), (M) | 34 | C, D, E, G, H, I | 20 | D, G, H | 20 | D, E, G, H |
4 | 33 | 20 | 20 | 36 | A, B, E, H, I, (C), (D) | 36 | A, B, E, H, I | 20 | A, B, E, G, H | 20 | A, B, E, G, H, I |
5 | 34 | 20 | 20 | 33 | A, B, D, G, H, (C), (M) | 33 | A, E, D, G, H, I | 20 | A, B, E, G, H | 20 | A, B, D, E, G, H |
6 | 28 | 20 | 20 | 19 | A, B, (D), (E), (H), (I) | 19 | B | 20 | A, B | 20 | A, B |
7 | 13 | 13 | 13 | 13 | A, B | 13 | B | 13 | A, B | 13 | A, B |
8 | 27 | 20 | 20 | 20 | E, G, H, (B) | 20 | E, G, H | 20 | G, H | 20 | E, G, H |
9 | 20 | 20 | 20 | 14 | A, B, E, G, H | 14 | A, B, E, H | 20 | A, B, E | 20 | A, B, E, G |
10 | 12 | 12 | 12 | 11 | G | 10 | G | 0 | Not tested | 12 | E, F, G, H |
11 | 26 | 25 | 25 | 22 | C, H, (B), (D), (E), (F) | 21 | H | 0 | Not tested | 25 | A, C, D, E, G, H |
12 | 26 | 25 | 25 | 15 | E, (C), (G) | 14 | E | 0 | Not tested | 25 | E |
Total | 364 | 261 | 269 | 290 | 275 | 207 | 269 |
Ambiguous slide agglutination test results are shown in parentheses. mSTM, modified Stuart's transport medium; LB, lysis buffer.