Table 3.

Summary of assembly of re-sequenced isolates and alignments to S15 genome

Isolates	Contig number	N50 (Kb)	Assembly size (Mb)	GC content (%)	N number (%)	Aligned length (Mb)	Aligned sequence (%)	Sequence identity (%)
S1	6116	50.39	33.12	52.87	0.26	30.61	92.42	96.46
S2	5800	55.67	33.02	52.88	0.24	30.21	91.49	96.45
S3	6156	51.20	33.09	52.91	0.21	30.58	92.42	96.60
S4	6328	52.94	33.30	52.89	0.26	30.55	91.75	96.66
S5	6499	49.51	33.19	52.86	0.29	30.49	91.85	96.55
S6	19,952	44.43	39.63	52.96	1.01	30.25	76.33	97.27
S7	6016	45.83	32.93	52.88	0.22	30.25	91.87	96.58
S8	6096	47.81	33.02	52.86	0.23	30.41	92.09	96.52
S9	5838	52.80	32.95	52.88	0.21	30.65	93.01	96.62
S10	5892	52.53	33.16	52.89	0.22	30.68	92.54	96.69
S11	5599	55.60	32.81	52.92	0.20	30.40	92.64	96.59
S12	5883	53.90	32.76	52.94	0.21	30.42	92.85	96.70
S13	6086	47.96	33.28	52.86	0.24	30.39	91.33	96.24
S14	5631	49.64	32.90	52.85	0.19	30.21	91.81	96.43