Table 7.
Reference-specific genes on scaffold38 and scaffold51 with annotations
| Gene ID | Brief description | GO ID | InterPro accession | InterPro name |
|---|---|---|---|---|
| evm.scaffold38.25a | Short chain dehydrogenase reductase | GO:0016491;GO:0055114 | IPR002347; IPR016040 |
Short-chain dehydrogenase/reductase SDR; NAD(P)-binding domain |
| evm.scaffold38.27a | MFS general substrate transporter | GO:0055085;GO:0016021 | IPR011701; IPR020846 |
Major facilitator superfamily; Major facilitator superfamily domain |
| evm.scaffold38.28a | Alpha beta-hydrolase | – | IPR029058 | Alpha/Beta hydrolase fold |
| evm.scaffold38.29a | Cytochrome P450 | GO:0005506;GO:0016705;GO:0055114;GO:0020037; GO:0016020 |
IPR001128 | Cytochrome P450 |
| evm.scaffold38.31 | Transmembrane | – | IPR008547; IPR029058 | Protein of unknown function DUF829, TMEM53; Alpha/Beta hydrolase fold |
| evm.scaffold38.32a | Short chain dehydrogenase reductase | GO:0016491;GO:0008152 | IPR002347; IPR016040 |
Short-chain dehydrogenase/reductase SDR; NAD(P)-binding domain |
| evm.scaffold38.33 | Hypothetical protein | GO:0016020 | – | Alpha/Beta hydrolase fold |
| evm.scaffold51.36b | – | – | – | – |
| evm.scaffold51.42 | Glucose-6-phosphate isomerase | GO:0004347;GO:0006094;GO:0006096; | IPR001672; IPR035476; IPR035482 |
Phosphoglucose isomerase (PGI); Phosphoglucose isomerase, SIS domain 1; Phosphoglucose isomerase, SIS domain 2 |
| evm.scaffold51.44b | Hypothetical protein | – | – | – |
a denotes the proteins having PHI-base database hits
b denotes the secreted proteins