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. 2017 Jul 12;33(14):i133–i141. doi: 10.1093/bioinformatics/btx261

Table 5.

Time to construct the weighted de Bruijn Graph, correct abundances globally in the weighted de Bruijn Graph, and perform local correction per edge in the weighted de Bruijn Graph (averaged over 1M local corrections)

Dataset Construction Global correction Local correction
(seconds) (seconds) (microseconds)
GSM984609 6605.65 14857.68 12.93
GSM981256 5470.83 15390.56 18.25
GSM981244 13373.78 22266.86 16.50
SRR1284895 8429.17 41218.85 16.62