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. 2017 Jul 12;33(14):i152–i160. doi: 10.1093/bioinformatics/btx270

Fig. 3.

Fig. 3.

Overview of PASTRI algorithm. (a) We observe variant-allele read counts A and the total number of reads D that align to the locus for n mutations across m samples of the tumor. (b) A clustering algorithm that does not require that the data is generated by a phylogenetic tree gives an estimate Q(F) of the posterior distribution over cluster cell fractions F. (c) PASTRI draws samples F¯ from Q(F). For each sample F¯, PASTRI enumerates the set TF¯ of trees T and assignments π of cell fractions to vertices of of T that satisfy the Sum Condition. All trees/vertex-assignment pairs not in TF¯ have a probability of 0. Algorithm estimates the posterior probability of each tree using importance sampling