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. 2017 Apr 12;33(16):2577–2579. doi: 10.1093/bioinformatics/btx220

Fig. 1.

Fig. 1

A flowchart of the HaploMerger2 (HM2) pipeline. HM2 comprises five functionally independent modules. Each module can work on its own. The users can run any module separately or choose some of them to form a specific pipeline, as suggested in the flowchart. In this specific pipeline, all but the second module are optional and can be iterated to achieve better results