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. 2017 Jul 12;33(14):i83–i91. doi: 10.1093/bioinformatics/btx231

Table 3.

Computational time (seconds)

Phase Text Type Language model
TFIDF LDA DEEP
Training Titles 5.8*10−5 1.0*10−3 4.4*10−1
Abstracts 3.3*10−4 2.9*10−3 9.0*10−1
Function Dsc. 6.3*10−4 1.5*10−2 1.2
Feature generation Titles 7.8*10−4 3.3*10−4 1.8*10−4
Abstracts 3.2*10−3 6.6*10−4 2.4*10−4
Function Dsc. 2.2*10−3 1.0*10−3 2.0*10−4
Classification Titles 5.1*10−2 3.8*10−3 9.2*10−3
Abstracts 1.2*10−1 4.0*10−3 1.3*10−2
Function Dsc. 7.0*10−2 5.3*10−3 6.1*10−3