Table 2.
Characterization of high-quality BLAST matches obtained in comparison of striped red mullet genotype by sequencing SNP against NCBI database. We only retained SNPs located in genes with putative functions that are compatible with the hypothesis of salinity adaptive selection acting on encoded protein. R2 and P-value referred to the linear regression between SSSmax and minor allele frequencies of each SNP
| SNP | Detection method | Uniprot | Gene | Protein | General function | R2 | P-value |
|---|---|---|---|---|---|---|---|
| TP221669 | PCadapt | AIT82984 | CYP7A1 | Cholesterol 7-alpha-monooxygenase | Bile acid and bile salt metabolism, bile salt export pump | 0.045 | 0.079 |
| TP106031 | PCadapt | ACO09386 | MSRA | Peptide methionine sulfoxide reductase | Enzymatic restriction of methionine sulfoxyde to methionine | 0.043 | 0.081 |
| TP346795 | LM | ACV85622 | SOCS2 | Suppressor of cytokine signaling 2 | Involved in JAK-STAT signaling cascades | 0.009 | 0.218 |
| TP61263 | PCadapt, LM | ACV85622 | 0.17 | 0.002 |