Antibodies |
|
Anti-HA (Y-11), rabbit polyclonal |
Santa Cruz |
Cat#sc-805; RRID: AB_631618
|
Anti HA affinity matrix, Immobilized Anti-HA high-affinity rat monoclonal antibody |
Roche |
Cat#11 815 016 001 |
goat anti-rabbit IgG-HRP |
Santa Cruz |
Cat#sc-2004; RRID: AB_631746
|
|
Bacterial and Virus Strains |
|
Endura competent E.Coli cells |
Lucigen |
Cat#60242-0 |
Klebsiella pneumoniae non-virulent strain, food source for Paramecium
|
Gift from Eric Meyer (ENS,Paris) |
N/A |
Baculovirus |
EMBL, Heidelberg |
N/A |
|
Chemicals, Peptides, and Recombinant Proteins |
|
Wheat Grass Powder |
Pines International,Lawrence,KS |
N/A |
B-sitosterol |
Calbiochem, Millipore |
Cat#567152; CAS: 83-46-5 |
Ribonucleoside vanadyl complexes |
Sigma-Aldrich |
Cat#R3380 |
Complete protease inhibitor cocktail |
Roche |
Cat#11 836 145 001 |
30% acrylamid:bisacrylamid 19:1 |
BioRad |
Cat#161-0154 |
|
Critical Commercial Assays |
|
T4 Polynucleotide kinase |
Thermo Fisher Scientific |
Cat#EK0032 |
MEGAscript T7 Transcription Kit |
Thermo Fisher Scientific |
Cat#AM1333 |
GoTaq G2 DNA Polymerase |
Promega |
Cat#M8296 |
Wizard SV Gel and PCR Clean-Up System |
Promega |
Cat#A9281 |
pGem-T Easy Vector System |
Promega |
Cat#A3600 |
|
Deposited Data |
|
All sequencing data of in vitro cleavage assays |
This paper |
Accession number ENA: PRJEB20111 |
|
Experimental Models: Cell Lines |
|
Sf21 cells |
EMBL, Heidelberg |
N/A |
|
Experimental Models: Organisms/Strains |
|
Paramecium tetraurelia strain 51 |
Gift from Eric Meyer (ENS,Paris) |
N/A |
|
Oligonucleotides |
|
See Table S1 for complete list |
This paper, Microsynth, Switzerland |
N/A |
|
Recombinant DNA |
|
DCL2-His |
This paper |
N/A |
DCL5-GST |
This paper |
N/A |
DCL3-Ptiwi09 regulatory, FlagHA |
This paper |
N/A |
Bac-to-Bac HT vector kit |
Invitrogen |
Cat#10584027 |
pFastBac M30, GST tagged vector |
From EMBL protein facility, Heidelberg |
N/A |
DCL4-Ptiwi09 regulatory, FlagHA |
This paper |
N/A |
|
Software and Algorithms |
|
Geneious R6.1.6 |
Geneious |
https://www.geneious.com |
WebLogo 3 |
WebLogo, Crooks et al., 2004
|
http://weblogo.threeplusone.com/ |