Table 2.
List of ORFs found in pChV1.
| ORF Number | Gene | Length | Domains | Best Hit Identity |
|---|---|---|---|---|
| ORF_01 | Chromosome partitioning protein ParA | 840 | ParA/Soj/Fer4 NifH | 93% |
| ORF_02 | Partitioning protein ParB | 885 | ParB | 96% |
| ORF_03 | Plasmid replication protein RepA | 951 | Plasmid replication initiator protein | 49% |
| ORF_04 | Conserved hypothetical protein | 477 | none | 82% |
| ORF_05 | Conserved hypothetical protein/putative bacteriophage lysis protein | 1029 | COG4623 | 82% |
| ORF_06 | Conserved hypothetical protein | 312 | SlyX | 97% |
| ORF_07 | Conserved hypothetical protein | 756 | Cadherin repeat/Ca2+ binding | 32% |
| ORF_08 | Conserved hypothetical protein | 1422 | none | 44% |
| ORF_09 | Conserved hypothetical protein | 1887 | none | 60% |
| ORF_10 | Conserved hypothetical protein | 363 | none | 99% |
| ORF_11 | Conserved hypothetical protein | 219 | none | 95% |
| ORF_12 | Conserved hypothetical protein | 1167 | DUF4157 | 48% |
| ORF_13 | Toxin | 801 | RhsA | 52% |
| ORF_14 | Conserved hypothetical protein | 708 | none | 63% |
| ORF_15 | Conserved hypothetical protein | 1125 | none | 98% |
| ORF_16 | Conserved Hypothetical protein | 126 | none | 52% |
| ORF_17 | Conserved hypothetical protein | 615 | Transposase | 99% |
| ORF_18 | Hypothetical protein | 726 | none | ND |
| ORF_19 | Conserved hypothetical protein | 891 | DUF4255 | 95% |
| ORF_20 | Conserved hypothetical protein | 1854 | ATPase AAA domain | 72% |
| ORF_21 | Conserved hypothetical protein | 2415 | none | 62% |
| ORF_22 | Conserved hypothetical protein | 453 | none | 78% |
| ORF_23 | Conserved hypothetical protein | 3768 | DUF342 | 95% |
| ORF_24 | Conserved hypothetical protein | 2439 | none | 82% |
| ORF_25 | Conserved hypothetical protein | 993 | ribonuclease e/dihydrolipoamide succyniltransferase | 66% |
| ORF_26 | Conserved hypothetical protein | 3168 | TIGR02243(phage tail-like region) | 77% |
| ORF_27 | Conserved hypothetical protein | 441 | none | 90% |
| ORF_28 | Phage baseplate assembly protein W | 399 | GPW gp25 | 71% |
| ORF_29 | Conserved hypothetical protein | 1593 | Phage Base V | 59% |
| ORF_30 | Conserved hypothetical protein | 729 | Phage Tube | 41% |
| ORF_31 | Conserved Hypothetical protein | 165 | none | 52% |
| ORF_32 | Conserved hypothetical protein | 456 | Phage T4 gp19 | 40% |
| ORF_33 | Phage tail protein | 447 | Phage T4 gp19 | 91% |
| ORF_34 | Phage tail sheath protein | 1416 | COG3497(phage tail sheath protein FI) | 63% |
| ORF_35 | DNA invertase | 624 | mpi/SR ResInv(Recombinase;DNA binding)/HTH Hin like | 97% |
| ORF_36 | Conserved hypothetical protein | 348 | HTH_XRE (transcriptional regulator family)/xenobiotic response | 97% |
| ORF_37 | Toxin HipA | 1350 | HipA/Rna Pol | 90% |
| ORF_38 | Conserved Hypothetical protein | 126 | none | 52% |
| ORF_39 | Plasmid replication initiator protein | 1182 | RPA | 54% |