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. 2018 Feb 23;8(4):1347–1365. doi: 10.1534/g3.117.300454

Table 1. Components of the 8 models included in this study. Each of these models is fitted with the linear kernel (GB) and the Gaussian kernel (GK).

Model General mean Fixed environmental effect Main genetic effect of line across environments Genotype × environment interaction (G×E) Random intercept of the lines Unstructured G×E Random residual
MM μ1 ZEβE Zgg ε (σ2)
MMl μ1 ZEβE Zgg Zgl (σl2) ε (σ2)
MDs μ1 ZEβE Zgg ge (σge2) ε (σ2)
MDsl μ1 ZEβE Zgg ge (σge2) Zgl (σl2) ε (σ2)
MDe μ1 ZEβE Zgg gE (σgEj2for each environment) ε (σ2)
MDel μ1 ZEβE Zgg gE (σgEj2for each environment) Zgl (σl2) ε (σ2)
MUC μ1 ZEβE u (UEK) ε (ΣI)
MUCf μ1 ZEβE u (UEK) f (FEI) ε (ΣI)