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. 2018 Feb 23;8(4):1347–1365. doi: 10.1534/g3.117.300454

Table 4. Maize USP data set. Estimated variance components for the multi-environment models, main genotypic effect model (MM), single variance G×E deviation model (MDs) and environment-specific variance G×E deviation model (MDe) with two kernels, GBLUP (GB) and Gaussian kernel (GK), with l and without l for grain yield (standard deviation in parentheses).

Variance Component* MMl-GK MMl-GB MDsl-GK MDsl-GB MDel-GK MDel-GB MM- GK MM- GB MDs-GK MDs- GB MDe-GK Mde- GB
σ2 0.547 (0.02) 0.548 (0.02) 0.49 (0.02) 0.503 (0.02) 0.487 (0.02) 0.503 (0.02) 0.589 (0.02) 0.854 (0.02) 0.538 (0.02) 0.834 (0.02) 0.534 (0.02) 0.833 (0.02)
σg2 0.371 (0.09) 0.175 (0.05) 0.343 (0.09) 0.164 (0.05) 0.362 (0.1) 0.165 (0.05) 1.899 (0.18) 0.214 (0.06) 2.012 (0.18) 0.209 (0.06) 2.026 (0.19) 0.206 (0.06)
σge2 0.091 (0.02) 0.045 (0.01) 0.077 (0.02) 0.029 (0.01)
σPLN2 0.159 (0.09) 0.055 (0.03) 0.162 (0.07) 0.031 (0.03)
σPIN2 0.104 (0.06) 0.048 (0.03) 0.107 (0.05) 0.034 (0.02)
σALN2 0.093 (0.07) 0.046 (0.03) 0.073 (0.05) 0.038 (0.03)
σAIN2 0.084 (0.06) 0.063 (0.03) 0.05 (0.04) 0.052 (0.03)
σl2 0.279 (0.03) 0.336 (0.03) 0.296 (0.03) 0.349 (0.03) 0.294 (0.03) 0.349 (0.03)
*

Locations are: Anhumas ideal N (A-IN), Anhumas low N (A-LN), Piracicaba ideal N (P-IN) and Piracicaba low N (P-LN)