Table 2. Summarized description of functional association of genes with various drought related ontology terms identified at different stages based on step-wise screening procedure.
Ontologies | Ontology terms | Ontology accessions | Identified genes | Merged and screened genes |
---|---|---|---|---|
Gene Ontology | Biological process | GO:0009414 | 167 | 126 |
Cellular component | GO:0005575 | 148 | ||
Molecular function | GO:0003674 | 133 | ||
Trait Ontology | Drought tolerance | GO:0009414, GO:0009819 | 150 | 296 |
Chlorophyll content | TO:0000495 | 12 | ||
Stay green trait | TO:0002712 | 2 | ||
Biochemical trait | TO:0000277 | 2 | ||
Leaf senescence | TO:0000249, GO:0010150 | 132 | ||
Growth & development trait | TO:0000357 | 2 | ||
Environment Ontology | Drought environment | EO:0007404 | 1165 | 1681 |
Sodium chloride regimen | EO:0007048 | 1193 | ||
Salt regimen | EO:0007185 | 398 | ||
Watering regimen | EO:0007383 | 2406 | ||
Cold temperature regimen | EO:0007174 | 1372 | ||
Plant structure ontology | Inflorescence | PO:0009049 | 10200 | 98 |
Tassel inflorescence | PO:0020126 | 32 | ||
Growth Ontology | Reproductive stage | GRO:0007140 | 2803 | 712 |
Seedling stage | GRO:0007047 | 9088 | ||
Booting stage | GRO:0007148 | 286 | ||
Early-booting stage | GRO:0007149 | 1949 | ||
Late-booting stage | GRO:0007150 | 1 | ||
Flowering Stage | GRO:0007151 | 6497 | ||
Heading stage | GRO:0007044 | 6454 | ||
Total | 23 | 23 | 11,987 (unique) | 2,224 (unique) |